These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGAAGAGTGGGTAGGTGCTCCACCTTTTGTGGTTGCTCA | 1 | 1.53513e-05 |
| AAGAAGATGGCTTCATCACACGAGCGTACATGGTGTATGT | 1 | 1.53513e-05 |
| AAGAAGCTTAATGTCGAGGAAGTGGGTATTTCATAAGTGT | 1 | 1.53513e-05 |
| AAGAAGGAAGTGGCATCGTTACTGACCTAGGTGCCGACAA | 1 | 1.53513e-05 |
| AAGAAGGGATATTAGGAGCGTGTGGGGAACGTGGCGGTGT | 1 | 1.53513e-05 |
| AAGAAGGGATGGAATAAAGTCGGCGGTTACGATCAGTCTA | 1 | 1.53513e-05 |
| AAGAAGGGGGCGGAGGGTGAGCATGTCGTCTCGTCCATCA | 1 | 1.53513e-05 |
| AAGAAGGGTTTGCAACTGGGGTCATTTGCCTAGTTGCAGT | 1 | 1.53513e-05 |
| AAGAAGTCATCCCGCGGGAGGAGTTCAGGATTGACACTTC | 1 | 1.53513e-05 |
| AAGAAGTGCAAGAGAGGATCAGAGTGAGTTTGCGGTACGT | 1 | 1.53513e-05 |
| AAGAATACACCGACGTGTCGCTAGGGGTTGCACGTTAGTG | 1 | 1.53513e-05 |
| AAGAATATGGTGTTCTCCGTACAACAGATGGTTGGCGAGC | 1 | 1.53513e-05 |
| AAGAATCACTACCAATCGGCGTGGAATGCAGGGAGGGGAC | 1 | 1.53513e-05 |
| AAGAATCATGCGATTCTGTTCCACGTTAGAGGGCGCCAGA | 1 | 1.53513e-05 |
| AAGAATCTATAATTTGAGTCACGCAATAATTGATAATTGA | 1 | 1.53513e-05 |
| AAGAATGCGACGCTGGGCGTCAATGACTACGGTGGACTGT | 1 | 1.53513e-05 |
| AAGAATGTCACGCAGGGGTGAGTGGGGGCGTGGGTGGCGT | 1 | 1.53513e-05 |
| AAGAATTATACGCAGGCGTAGTAGTTGTGGGTATGTTTGT | 1 | 1.53513e-05 |
| AAGAATTGTTGTCGATCCTTGACGTGTCGTCCGTGTCGCG | 1 | 1.53513e-05 |
| AAGAATTTAGAGTAGAGGCCATGACTGTGACGTGACCGGT | 1 | 1.53513e-05 |
| AAGAATTTCTCTTCCAGCGTGGGGACAGTGCTCGCTTATG | 1 | 1.53513e-05 |
| AAGACAAAGCCTGGTACGGCGCAGAGATAGGTGGGATCTC | 1 | 1.53513e-05 |
| AAGACAACAAGATTGGTATCATGCTCAGGCGCCTTCCAGG | 1 | 1.53513e-05 |
| AAGACAAGCGGGGTTGAGGTACCCATATGGGCCTAGGGAA | 1 | 1.53513e-05 |
| AAGACACACTGTGTACTGGCACTAGTTGCTCGGTGTAGCG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.