These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGACACGTCGGATGACGGGCTATAGCAGTTACCAGGTTC | 1 | 1.53513e-05 |
| AAGACACGTGCTTCAACCGTTAGATCCTGCGTGGGCCTCA | 1 | 1.53513e-05 |
| AAGACACTGCGGGTATGGCGATCAAACTAGCGCGCATCGC | 1 | 1.53513e-05 |
| AAGACAGTGGGTCTTGTCTCTCACACGCAGTTGGCTAGTG | 1 | 1.53513e-05 |
| AAGACCACTTCTATTCAAGAGAGTGGAGGTCAAGCGGATT | 1 | 1.53513e-05 |
| AAGACCCAGACGACTTGGGTCCTGACAATTAGCAGGTGCG | 1 | 1.53513e-05 |
| AAGACCCTTGTGGGAGCGGGCGGGCTTAAGTGGGGTAGAG | 2 | 3.07026e-05 |
| AAGACCGATTGTTAGGGGGAATGTAGTCTCTCGCGTGGTT | 1 | 1.53513e-05 |
| AAGACCGGTCGGGTCCGTGCAGTAGTTCCTGGCGTCCGCG | 1 | 1.53513e-05 |
| AAGACCTGCCATTACTCCTAGAAGACGTCTTAGGTTGGAT | 1 | 1.53513e-05 |
| AAGACGAGATGGATTTGAACCCCCCATGTGAGGCCGACGA | 1 | 1.53513e-05 |
| AAGACGAGCGGGTGCGTTGTTTAGGACAGGAGCGGACGAA | 1 | 1.53513e-05 |
| AAGACGATATGTCTGGCGGACATGACGTGGTACCGTTGTG | 1 | 1.53513e-05 |
| AAGACGCATTACGATCTGTTGGGAGTCCATGAGGTTTCCT | 1 | 1.53513e-05 |
| AAGACGCCTACCTCAGAAGTGGGGGCGACCCGTGAGTGGG | 1 | 1.53513e-05 |
| AAGACGCGTGAGCGGGGGTGGTCGGCGTCAGCAGTCTACG | 1 | 1.53513e-05 |
| AAGACGGAATGAGTGGGTAAGTTGGTCGATTTGTCCTCAC | 1 | 1.53513e-05 |
| AAGACGGACACGGTGCGGAGGCGTAGGGCCCCGATAGTCT | 1 | 1.53513e-05 |
| AAGACGGCGGCCAAGATGGCGCGTGGAACGGAGCGGAGTC | 1 | 1.53513e-05 |
| AAGACGGGCATAGGCGTGAGGCGCCGATCGCTTACGTGGG | 1 | 1.53513e-05 |
| AAGACGGGCGTTGTGGCAGTCTGTGGAATGCCCGACGTAC | 1 | 1.53513e-05 |
| AAGACGGTACGTTCACGTTGACAGGGTAATCCGGTAAATT | 1 | 1.53513e-05 |
| AAGACGGTGGGCGGCCGGTCTCACGGGGGGAGATGTTGTC | 1 | 1.53513e-05 |
| AAGACGGTTCGTAAAATACGGCAGGTGACGGTTTTCACGG | 1 | 1.53513e-05 |
| AAGACGTGAGCGAAGCACGTTGTTGCCAGGTATGGTGCTG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.