These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGATTAGTTTGAAGATTGAAATTTCACAGGATAGCCCAT | 1 | 1.53513e-05 |
| AAGATTCTAATGATGTCTGAAGGTTTGTCTATATTGAGGG | 1 | 1.53513e-05 |
| AAGATTCTCTCAGAATCAGACCGGGCGTCGCGCGAGCGTT | 1 | 1.53513e-05 |
| AAGATTGAGACAGTTGTTCAACAACGCAGCCGCGTGTATG | 1 | 1.53513e-05 |
| AAGATTGATGGGCTTGCCTAATCTGCCACGCATGTCTTTA | 1 | 1.53513e-05 |
| AAGATTGGGTGGTGATAGGGCAGAGGTTGTCGAGTCGCCA | 1 | 1.53513e-05 |
| AAGATTTCTGGGCTGTTGGGGGCGGGATTTGTGTAGCGGG | 1 | 1.53513e-05 |
| AAGATTTGCCGTCGTGAGACCTAAGGATCTTAGGGTGAGC | 2 | 3.07026e-05 |
| AAGCAAATAGGGCTAGGCGTCTATGCAGTAATGTCTCGCG | 1 | 1.53513e-05 |
| AAGCAAATGTGGAAAGTTGAGGGCTCGGTGTGATAGTGGC | 1 | 1.53513e-05 |
| AAGCAACCATAAGTTGATTTGCGGGGAAAATCCTGATCGT | 1 | 1.53513e-05 |
| AAGCAACGGTAGGGCCTGATTGAATGTCCGTTGCGTGGAC | 1 | 1.53513e-05 |
| AAGCAAGAGAGATCCAGGCGTTCTCGAATAAGCTTTCGTA | 1 | 1.53513e-05 |
| AAGCAAGGGTCCTAGTCTGTAAGGGAGGGCGCGGCGTGTG | 1 | 1.53513e-05 |
| AAGCAAGGTGGTGTGGGAGTGGGCAGGGTGAATTTGGGAG | 1 | 1.53513e-05 |
| AAGCAAGTACACGGCGCCTTGGTGAGTGCCTCTGTGTAAT | 1 | 1.53513e-05 |
| AAGCAATAGGGGCAGCTTCCAGACCGGGGCGTGAGGACCG | 1 | 1.53513e-05 |
| AAGCAATAGTTTAGATAATGTTGAGTCCTAGTTCCGGCGG | 1 | 1.53513e-05 |
| AAGCAATGAAGTGGTGGAGACGATTGGCAAGGACGAGATA | 1 | 1.53513e-05 |
| AAGCACACGTATAGGCCGACTGGGGAGTGCGGTGTCGGGT | 1 | 1.53513e-05 |
| AAGCACCCACGGGGACGTGTTGTGGAGGCGGACAGTGGGG | 1 | 1.53513e-05 |
| AAGCACGCACGGCAGAGAAACGGGTGGGCGTATAAAGTTT | 1 | 1.53513e-05 |
| AAGCACGGCCGGGGAAAAGGACGTAGTCAGGGTGATAGGG | 1 | 1.53513e-05 |
| AAGCACGTAAATAAGAATACAAATAATCGTTGGAGACCGG | 1 | 1.53513e-05 |
| AAGCACGTCACGTCGGCGCCCACAGGACCTCATGTAAAAG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.