These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCACGTCTGCTGAGGCGACTAGCTGATTAAGCCGAGTT | 1 | 1.53513e-05 |
| AAGCACTAGTGGTAATAGTACTCTAATGCCATATGGCCAG | 1 | 1.53513e-05 |
| AAGCACTCGATGCACGACTCTTCAAAGTGTCGGGGTCAAT | 1 | 1.53513e-05 |
| AAGCACTTGGTGGTTTGTAGTGTTTCAGTCGGCTCCTCAA | 1 | 1.53513e-05 |
| AAGCAGAAGGTGTGTACGACGTAACATCACGGGGTGTGGT | 1 | 1.53513e-05 |
| AAGCAGCCCGCAATTGCGCTTAGTGCAGGACCCAGCTTTT | 1 | 1.53513e-05 |
| AAGCAGCTGAGCGTCAAATGCTCCGACACGGGTTCGGTTT | 1 | 1.53513e-05 |
| AAGCAGGAAAGAAAGTTCGGAGAAGCTTGGGGTCTGGTGG | 1 | 1.53513e-05 |
| AAGCAGGACGGGCGGGAGGAAGAAGTTCAGGGTTAGAGGT | 1 | 1.53513e-05 |
| AAGCAGGATCTGCCGAAATGCATTGATTCTAGGTGATTAT | 1 | 1.53513e-05 |
| AAGCAGGCGGTAAGATGTGAAGTGGTACTGTCTCTGTGTC | 1 | 1.53513e-05 |
| AAGCAGGGGAGCTCGGGCCGGGCGCGGAGACTAAACGGAT | 1 | 1.53513e-05 |
| AAGCAGGGGAGGTTCTAGAGGGGAAATGGAGAGACTCACG | 1 | 1.53513e-05 |
| AAGCAGGGTGGTTGTACGTACCGTGAGCATCTGGAAGTAC | 1 | 1.53513e-05 |
| AAGCAGGTAGTAGCAACGTGATATAGATTGCGTGGGTTAT | 1 | 1.53513e-05 |
| AAGCAGGTGGGGGGACGGGTTGGAAACAGTTTGTCAGACG | 1 | 1.53513e-05 |
| AAGCAGTCCTGAACCCGCTCGTTGTATGTGAGACGCTGTA | 1 | 1.53513e-05 |
| AAGCAGTGATAGATGATCGGCACGGGTGGGCATACGGTTT | 1 | 1.53513e-05 |
| AAGCAGTTCGGCGGTACTGCACCAGGTGGTGCAGTGATCG | 1 | 1.53513e-05 |
| AAGCAGTTGTGAGTGTGGGCTTATGACAGCGGCATGACTG | 1 | 1.53513e-05 |
| AAGCATCAAACGCGGCAACGCACGGCTCGGTGCATCATTT | 1 | 1.53513e-05 |
| AAGCATCCTCGTGAGGTTCACAGGGTCAGCCGAATCTTCG | 1 | 1.53513e-05 |
| AAGCATCTAAGCACGTGGAGGGATGGGACTTTCGGGTGGG | 1 | 1.53513e-05 |
| AAGCATGCAAGTTATCCCGTCAGGCGTGGGAAGACGTGGA | 1 | 1.53513e-05 |
| AAGCATGGATGGGTTGGCGATTAGATGTTGTCGTAGACGA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.