These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTGTGAACCGACAGTGGGGCTGGCCCGTGGCGGGCTTG | 1 | 1.53513e-05 |
| AAGTGTGAGGGTGGGCTGGGCGACTGGTTGAAGAAGATTG | 1 | 1.53513e-05 |
| AAGTGTGCGTGTGAATTTACGCCTGGAAGCGTGGGTAAGG | 1 | 1.53513e-05 |
| AAGTGTGGAACAACGTTGGGAGAGGTACCTTATGGACGAA | 1 | 1.53513e-05 |
| AAGTGTGGGACCGAGGAGTATTAGTGCAGGACGCGTGAAC | 1 | 1.53513e-05 |
| AAGTGTGGGCACAGCATGCTTTCTAAAGAGTGTGCCGTGA | 1 | 1.53513e-05 |
| AAGTGTGGGTGGCGGTAGGACGTATGATTGACGTGAATAA | 1 | 1.53513e-05 |
| AAGTGTGTATAGATAAGTTCCCCTGAGAGGCTCACACCTT | 1 | 1.53513e-05 |
| AAGTGTTATATCTGTGTTCACCCGTGATAATGAGCGGGAC | 1 | 1.53513e-05 |
| AAGTGTTATTGAGAGAGAAGCGCCACGCGTGTCAGGGTGT | 1 | 1.53513e-05 |
| AAGTGTTCCACGCGAGGCTTTGGGGGGATGAAGTCTAGAG | 1 | 1.53513e-05 |
| AAGTGTTCTTTAGGTGCCCATGCGTGCTGCGGTGACTTAG | 1 | 1.53513e-05 |
| AAGTGTTGCGGTCCTACAGAGGCAGTAGCGGTATGTGAGT | 1 | 1.53513e-05 |
| AAGTTAACCCACGTGTGAACGTGAGTGTTTATGGTCGACG | 1 | 1.53513e-05 |
| AAGTTAAGGGAAGAAATGTGCGTGATTTATAACGGGAGGG | 1 | 1.53513e-05 |
| AAGTTAATAGGCACAGAAGGGGGGCGGATGCCACACGCAA | 1 | 1.53513e-05 |
| AAGTTAATCACGGGGCCCTGTGATAAATAAGACGCGGCGG | 1 | 1.53513e-05 |
| AAGTTAATTGCGCGGGAACATTGACTAAGGGCTAGTAGAA | 1 | 1.53513e-05 |
| AAGTTACGGAACGCCGCGCGGCCTGTCGTGGGGTGTTTCC | 1 | 1.53513e-05 |
| AAGTTACGGAGTTGTATATGGGTACGAGGCTTTCTAGGTG | 1 | 1.53513e-05 |
| AAGTTAGAGAGTATACGCGCGTGGGTCAATCGTACTTTCA | 1 | 1.53513e-05 |
| AAGTTAGCACGCGTTGTGGGTCTGCTTGGGACGTAGCGAT | 1 | 1.53513e-05 |
| AAGTTAGGTAGCACGCTTATGTAGGACAAGAGAGGTCACG | 1 | 1.53513e-05 |
| AAGTTAGTGGGGATCTTAAGTAACCTGTTCACCTAAAGAG | 1 | 1.53513e-05 |
| AAGTTATCGTTGGTGTAACTGAACGGTAATCTCAGTCCGA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.