These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTTATGTGGGCGTGTGCGAGGGGACCTAGAGTTACGCC | 1 | 1.53513e-05 |
| AAGTTATTTAAGGATGTTCCTTACGGGGGGTATAAGCTGA | 1 | 1.53513e-05 |
| AAGTTATTTCGTTCAAGGATGCGTGGGGTCTGGTAACTTT | 1 | 1.53513e-05 |
| AAGTTCAAATGTATGGGTAGGGTAGTGGCCTCCGTTTCAG | 1 | 1.53513e-05 |
| AAGTTCAGGGTTAAATTCTCAGTATAGTCTGCTGCGTGGC | 1 | 1.53513e-05 |
| AAGTTCATATTCAAATGCTGAACGGGCCCGTGGGGTTTTC | 1 | 1.53513e-05 |
| AAGTTCCACTATGGCTATTCCACACTTCACGAGAGGTTCC | 1 | 1.53513e-05 |
| AAGTTCCTGGACTAGTAGTGGGCCGTGGTTCGATTAAGGG | 1 | 1.53513e-05 |
| AAGTTCGAACTGCCAGTTAGAAAGCGGGATCGAATGAGCA | 1 | 1.53513e-05 |
| AAGTTCGGACAATGTGCAAGACCTACGGGTCCAATGCACA | 1 | 1.53513e-05 |
| AAGTTCTCGCCTACGGCAAGTGCGTTCTCTGGGATGAGGC | 1 | 1.53513e-05 |
| AAGTTCTCTCGTGCACGAATCTTATTGAGGGGGTGGTTCA | 1 | 1.53513e-05 |
| AAGTTCTGCGTGGAAGGCAGGGCTACGCTGGCGGGCGTGA | 1 | 1.53513e-05 |
| AAGTTGACGTTTCACTCTCATGACGGCCGCTTATGGGTTC | 1 | 1.53513e-05 |
| AAGTTGAGAAGGGAGTGTGCGCTATTACGTCCAGGCCGGG | 1 | 1.53513e-05 |
| AAGTTGAGTTATTGCGGAGGAGTTGAAGTTAGTCACGCGT | 1 | 1.53513e-05 |
| AAGTTGATATCGTCGACGTAGAGTGGAGAGCCGGTCATGG | 1 | 1.53513e-05 |
| AAGTTGCAGTGAAGAAATTGGTATATCGAGATTTAGTAGT | 1 | 1.53513e-05 |
| AAGTTGCTGTAACCCACTTGCTCGTTGCGCGCGTGTATAT | 1 | 1.53513e-05 |
| AAGTTGGAGAGTGGAGTGGCTGGTGGTTTGTGGGAAAATG | 1 | 1.53513e-05 |
| AAGTTGGATGTAGAAAACATATTTCCTACTATTACTAATT | 1 | 1.53513e-05 |
| AAGTTGGCTTGACGTTGATTCGCTGTTCACACAGGACGTA | 1 | 1.53513e-05 |
| AAGTTGGGCATCTTGGTGGCGTTGTCTAGTGCAGAGGCAC | 1 | 1.53513e-05 |
| AAGTTGGTACGGTTGCCGGTTATATCGTCGACTAACTTTG | 1 | 1.53513e-05 |
| AAGTTGGTACTTCTGCGAACTGGTATTACAACTGATACCA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.