These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGTTGGTATTACATGGTGCGATTTGCTAGATGGGCGTCG | 1 | 1.53513e-05 |
| AAGTTGGTTGCGCAAATGCCGGTGGGACTGAAGTGTTCAG | 1 | 1.53513e-05 |
| AAGTTGTCAACGGAGGAAAGCGCCTGTGTTGCGAACAGCG | 1 | 1.53513e-05 |
| AAGTTGTCTCTTACGTGGCGAGGCATCGTATTGGCTGGGC | 2 | 3.07026e-05 |
| AAGTTGTGAGTATGTGACTTAAGGGCATGCAGACTCCGCT | 1 | 1.53513e-05 |
| AAGTTGTGGCGTGACGTGGAATGATGGCGTCCCCACCTAG | 1 | 1.53513e-05 |
| AAGTTGTGGGTATATATGCAGGGCATAATTCGGGTAGGGA | 1 | 1.53513e-05 |
| AAGTTGTGGTTTCCGAAGAACAGTGTTGTAATTCTGGACG | 1 | 1.53513e-05 |
| AAGTTGTTCAGTTGTGGGTAGGCCTAAACTATCCCATCGG | 1 | 1.53513e-05 |
| AAGTTTAATGCGTGGTATGGCCACCCCATTCCCTGGGGGG | 1 | 1.53513e-05 |
| AAGTTTACACGAGTGGGCTACTGGCGCCGCGGGACGTTGA | 1 | 1.53513e-05 |
| AAGTTTACTGCTTACTGTCGCGCTAGGTTATAACATTTCT | 1 | 1.53513e-05 |
| AAGTTTAGACATGTCTTTGGAATCGTGGTTGAACGTGTTA | 1 | 1.53513e-05 |
| AAGTTTAGAGTAATAGGCATGATAGGGCCCGTGGGGACAG | 2 | 3.07026e-05 |
| AAGTTTAGCAACACGTCAGCATAGTGGGTTGGTCGACTAT | 1 | 1.53513e-05 |
| AAGTTTAGCCTCAAATAGTACGTGCGTGGGGGCGGTCGGC | 1 | 1.53513e-05 |
| AAGTTTATTACACTAGCCTGTACTGTATTGGCGGGGCACG | 1 | 1.53513e-05 |
| AAGTTTCACTGCGAATCTCGTCGAGCAGGGTTCTACTATG | 1 | 1.53513e-05 |
| AAGTTTCCCTAAAGAGGGATTGATCGCTGCGCTAATAGCT | 1 | 1.53513e-05 |
| AAGTTTCTGCCCATAAGTATGTCTGCGGGGAGGGAGTGTG | 1 | 1.53513e-05 |
| AAGTTTCTGTGCCCCCTCGGGGAGGGAGTTGTTGACAAGG | 1 | 1.53513e-05 |
| AAGTTTGAGACAGCGCTGTCGGGTAAGTGCAAGGGGTCGT | 1 | 1.53513e-05 |
| AAGTTTGTCCGATTAGGCTTAACGGTTAGACTTAAGACTA | 1 | 1.53513e-05 |
| AAGTTTGTGGGAGATGTGGGGTAGCCGCTGTGTTGTTTAT | 1 | 1.53513e-05 |
| AAGTTTGTGGTGCCAACCATGCACCATCGTATTAGAGGCC | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.