These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATAGATCGTGTTGGGTCGGGCCCAACAGCTGCGGTGCGG | 1 | 1.53513e-05 |
| AATAGCAAGGCCCTTCGGGCCTGGGTTTCAGCACGCAGGT | 1 | 1.53513e-05 |
| AATAGCACCGTGGGGACTCAGCCTGCGTGGGGGCGCGAGA | 1 | 1.53513e-05 |
| AATAGCATGAGTGCGGGCAGGATCTGTGTAAAGTATGCGT | 1 | 1.53513e-05 |
| AATAGCCGCGTGGATCCGGAAAAGTCTCCTCGACGTGGGC | 1 | 1.53513e-05 |
| AATAGCCTTGGGATTTATGGTCACGTAGGTGCGTGAAGGT | 1 | 1.53513e-05 |
| AATAGCGGGGTGAGCGTGTTATACTTAGACGATGACGCCT | 1 | 1.53513e-05 |
| AATAGCTTTTCGAGTAAGGGCAGGGTCAGGTATGTCACGA | 1 | 1.53513e-05 |
| AATAGGACGACGGCAGTTTCAGCTGGTGTTAACCCACGAG | 1 | 1.53513e-05 |
| AATAGGAGAGTGGGCTGAGTATGAGTGGGCTATAACACGC | 1 | 1.53513e-05 |
| AATAGGAGGGTGGGAGCGCTTGAAGGACTGCCGCCTGCGT | 1 | 1.53513e-05 |
| AATAGGATGCCATAAGCGTTAGGATCCATTCGAAGGGGTA | 1 | 1.53513e-05 |
| AATAGGGACGCATGGTAAAGGTTACCACGCTTACCGTCTG | 1 | 1.53513e-05 |
| AATAGGGACTACATTCAGTTTTTGCGTAATAGGGATTGTC | 1 | 1.53513e-05 |
| AATAGGGACTGCCCATAGAGCAAGCCGGGGAGAACCATTT | 1 | 1.53513e-05 |
| AATAGGGCTAGGGCATAACTGAGGGTGAAAGTTTGACACG | 1 | 1.53513e-05 |
| AATAGGGCTCTTGCTCGAGATTCGTGTTGATTTTTGGCGT | 1 | 1.53513e-05 |
| AATAGGTATGGTTTACTACGTTTGGCGGTGACGAAATTGT | 1 | 1.53513e-05 |
| AATAGGTCATCTTGCAATGCTAGTACACCTGTCATGATTT | 1 | 1.53513e-05 |
| AATAGGTCCGTGGATATGCTGAGAAGTAATGAGGGCCGCG | 1 | 1.53513e-05 |
| AATAGGTGATCATTACACGGATATAATGGGCAAAGGCACG | 1 | 1.53513e-05 |
| AATAGGTGTCTCCACGCGCTCATATGTGACTGTCTAAACG | 1 | 1.53513e-05 |
| AATAGTAATAACACCTTGCATGCTACAACCGTTAAGGACG | 1 | 1.53513e-05 |
| AATAGTACTGGTTGTAAATTCTGCGTGGGTTGCGTTTTTA | 1 | 1.53513e-05 |
| AATAGTAGAGAAAGGATTAGCGTATTTGCGGTTCTGACAG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.