These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATAGTAGTTCATCACGAAGGATGTAGGTTCCAAGGCAGT | 1 | 1.53513e-05 |
| AATAGTATCGTCACGACCCACGTAAACCATATAGTGGTGT | 1 | 1.53513e-05 |
| AATAGTCCGGCGCCGTGAGGCGGGGTCTATGCGGGCTAAC | 1 | 1.53513e-05 |
| AATAGTCTTATAGTGACGTATAGTCATATTACCGCGCGTG | 1 | 1.53513e-05 |
| AATAGTGCTGTAACAGTCTAGCGTGACCGGGGAAGCCGGT | 1 | 1.53513e-05 |
| AATAGTGGGACCTAGACGTTGCCACATTGAAGGAAATCGC | 1 | 1.53513e-05 |
| AATAGTGGGACGGCCTGCTTTTGGCGTGGGTTGTCGAGGC | 1 | 1.53513e-05 |
| AATAGTGGTCGACAGACGCTTGCGTTGGCCTTACTCTGCT | 1 | 1.53513e-05 |
| AATAGTGGTCTGATGCGGACTTACCGCTGCGGGTAGGGCA | 1 | 1.53513e-05 |
| AATAGTTGCGTATGCTGTCGGAGTTTGCATTAGGGGTTGT | 1 | 1.53513e-05 |
| AATAGTTTTAGCTTATTGACTCATAAACGGTGGAAAGCTG | 1 | 1.53513e-05 |
| AATATAAGACAGGCTATACCTTCTTACCTTCCTGCAAGAG | 1 | 1.53513e-05 |
| AATATAATTTAGTGCGAATGTGACACGAACGGGGGTGATT | 1 | 1.53513e-05 |
| AATATACACGGTGTTAGTGTGCGTCTAGGAGGGTACCACG | 1 | 1.53513e-05 |
| AATATACGGCTCTGTGACAGAGGGTGTGGTGGGGGCGGAT | 1 | 1.53513e-05 |
| AATATAGCGTCCGTGCTAATGTTTCGGAAATAGGGTTCGG | 1 | 1.53513e-05 |
| AATATAGGAGGTCCGAAAGTAGTCTGCTTGATGAGAGCGT | 1 | 1.53513e-05 |
| AATATAGTACTAGTATTGCGGTAGCCCGTCCAGGAACACA | 1 | 1.53513e-05 |
| AATATAGTTACCCAAAAGCTTGTCGCTCTGCTGGTGTCCA | 1 | 1.53513e-05 |
| AATATATTACATAATAATAGCTGAAAGTTTGGCAGGCCTC | 1 | 1.53513e-05 |
| AATATCAATTTCGAGCTGGCTACGCGATTAGTCTAGGGCA | 1 | 1.53513e-05 |
| AATATCAGCGTCTGAGGGGGCCGTAGAGTGCGGGGGGGGC | 1 | 1.53513e-05 |
| AATATCCACAGTGATAGCGGGGTGTGTGGGGTTCTGCGAG | 1 | 1.53513e-05 |
| AATATCCTAATCTGAGGCTGGTCTCGGGTCGGGGGACTAG | 1 | 1.53513e-05 |
| AATATCGAGCGGAAAGCTTGTGTCAGTAGGATATTGTTGG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.