These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAGAGCGCTGCGCTCATCGCGTGAATAATCAGTCCAGTT | 1 | 1.53513e-05 |
| ACAGAGCGGGAGTGGGACAGTATCTTAGTGGGTCGTTTCA | 1 | 1.53513e-05 |
| ACAGAGCTTTTCTTACGCGATGGATGGTGCTGTGTATGCC | 1 | 1.53513e-05 |
| ACAGAGGAGAGAATCTAGATCTGGTGTGCGCGGGTGCTCT | 1 | 1.53513e-05 |
| ACAGAGGAGAGATTATCATGAGGTTGAATCCTGGTCTAAG | 1 | 1.53513e-05 |
| ACAGAGGAGCCTTTTACGTGTCGATAGGGGAGTAGTTAGG | 1 | 1.53513e-05 |
| ACAGAGGAGTGCGTAATAGTCAGCGTGTACCTAAGAAGGG | 1 | 1.53513e-05 |
| ACAGAGGATCTGGGTGTGAACTCGTTGGGTCTGTCTGAAC | 1 | 1.53513e-05 |
| ACAGAGGGATTGTATTAATGAATACCTGTGGATAGTAGAA | 1 | 1.53513e-05 |
| ACAGAGGGCGTAGAACATAGTGGAAGACTCTCCCGGTAAG | 1 | 1.53513e-05 |
| ACAGAGGGTGGGGGATAGCGGGATCGGGATATCACGGCTT | 1 | 1.53513e-05 |
| ACAGAGGTGTCGCGTGAGTCACGCAAGCGCGAGGGCCCTC | 1 | 1.53513e-05 |
| ACAGAGGTTTAATTTCATACATTTGTGTGAAGTCCACGAT | 1 | 1.53513e-05 |
| ACAGAGTATCTATGCGGTTTCAAACGTCAGTGAATGTTAG | 1 | 1.53513e-05 |
| ACAGAGTCGCGCATGAACCGGGCAGTCGCCCGGCACGACA | 1 | 1.53513e-05 |
| ACAGAGTCGCGCATGAACCGGGCAGTCGCCCGGCCCGACA | 1 | 1.53513e-05 |
| ACAGAGTGGACGTATATTATAGTTAGTGGTACCGGGCTTT | 1 | 1.53513e-05 |
| ACAGAGTGGAGACAGGACCTTGGAGCGACGCGGGTGTGAG | 1 | 1.53513e-05 |
| ACAGAGTGGATATGACCCCCTTGGCGTCGCTAGTTCGGGA | 1 | 1.53513e-05 |
| ACAGAGTGGGCCCGCTAGTCCTCCTGTATACGCTCGTTTT | 1 | 1.53513e-05 |
| ACAGAGTGTGGAGGGCCGTAAGATGAAGTGCCGCGGGATG | 1 | 1.53513e-05 |
| ACAGAGTTCCTACGTCCTATGGATGCCCACGTTTTCCCGC | 1 | 1.53513e-05 |
| ACAGATAAGACGGCTCTAGGGTGGCAGATGTACGCGACGG | 1 | 1.53513e-05 |
| ACAGATAAGGGGGCGGACTCTAGGATAGACATGGCTGGGT | 2 | 3.07026e-05 |
| ACAGATAATATCGGGGCCCTTTTGTGTTGGTGATTGTCCA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.