These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACAGATAGTGGGCTCGGCTAGTGAACTACGAAACGAGAGG | 1 | 1.53513e-05 |
| ACAGATATCGAATCCTCGCCGGTACCTGTCGCATGTGAAT | 1 | 1.53513e-05 |
| ACAGATCATGAATGGTCGTGGGGCGGACTTGAGTGTTTCA | 1 | 1.53513e-05 |
| ACAGATCCGAGAGAATAAGCGTGTCGATCGGTGATCAAAG | 1 | 1.53513e-05 |
| ACAGATCGAGTGGGTTATGTTTGCGTGTGGGGCGGGCAGT | 1 | 1.53513e-05 |
| ACAGATCTCTCACTTTGGGGAGGCACCAGTGGGTGCGCCA | 1 | 1.53513e-05 |
| ACAGATGATAGAGCTCAGCTCTATGCGCGTGGCATTACAA | 1 | 1.53513e-05 |
| ACAGATGGATGTGTACCCTATGCGTGGCTTGGCGTAGAGC | 1 | 1.53513e-05 |
| ACAGATGGTGGGTGGGCCCGGGAGAACTTCGCAGTGAGGG | 1 | 1.53513e-05 |
| ACAGATGTGTTCCTGCATTCGAGGGGGGCTAACTAAGAGA | 1 | 1.53513e-05 |
| ACAGATGTTTTTGGGCTTTCGAATACCCGTGTAATTATAA | 1 | 1.53513e-05 |
| ACAGATTCTGGGCCGGACGCGATGCGTGGAAGTAGTCCTT | 1 | 1.53513e-05 |
| ACAGATTGAATGGTAGCCACGGTCCGGGTGCGGGCGTGGC | 1 | 1.53513e-05 |
| ACAGATTGAGGATATACTATTTAAAGATTGACACTAGGAC | 1 | 1.53513e-05 |
| ACAGATTGCACAATGGCTGGTGCCGTGACCGTGCGGGATA | 1 | 1.53513e-05 |
| ACAGATTGTGATCCACACCGAGTGTGATCGCCCCCACTAT | 1 | 1.53513e-05 |
| ACAGATTGTGATTTTATAGAAATTATGTAGGCAATGTTCT | 1 | 1.53513e-05 |
| ACAGATTGTGGATCTGCCATGGGTTCTAAAGCTAAAGATG | 1 | 1.53513e-05 |
| ACAGCAACGAATGTCCGGGACGGTGAGCTCACCGTCGTGG | 1 | 1.53513e-05 |
| ACAGCAACTCGTGCAAGCCCCGTGTATTTCGGGGGATCGC | 2 | 3.07026e-05 |
| ACAGCAAGTGGCACGTAGTCACACGCGTGTATGTGTGGGC | 1 | 1.53513e-05 |
| ACAGCACAAATTATCTGGGTGTCGAGGGGCGACGTCCTAA | 1 | 1.53513e-05 |
| ACAGCACGTGAGGTTTGCCAGTGATGTTTCTGGTTCTCTT | 2 | 3.07026e-05 |
| ACAGCACTCGCGCTCTTAGAATGTTGGCGTGGCGGGTACC | 1 | 1.53513e-05 |
| ACAGCAGAAAGTGGGAAGGTATATGATGGAATCGAGCGGC | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.