These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACATGAGCGCTTTCTTGCGGTCAGAGGGAAATACGTGGGT | 1 | 1.53513e-05 |
| ACATGAGCTGGTGTGGGCGCTGTTTATGTGAGCGAATATC | 1 | 1.53513e-05 |
| ACATGAGCTGTGAGTCGTCCATGGCGTGGGAGTGCCGAGA | 1 | 1.53513e-05 |
| ACATGAGGGTGGCGTGATAAGCGATTACACCGGGTGGGTA | 1 | 1.53513e-05 |
| ACATGAGGTGGTAGGAGGTGGCGTCCCGTGTGCAGTGGGT | 1 | 1.53513e-05 |
| ACATGAGTGGTTGCGGGACCCGAGTGTGGGGAGCAGGTGT | 1 | 1.53513e-05 |
| ACATGAGTTATGTTGAAACCCGAGCAGAGTGACGTGGGTA | 1 | 1.53513e-05 |
| ACATGATCTTGCCAAGAGGTTTTCACTCCCATTGGCAGTC | 1 | 1.53513e-05 |
| ACATGATCTTGTGGGTGGGTGCGGTTTGATCGACTAGTGG | 1 | 1.53513e-05 |
| ACATGATTAGCTGGTGAGCGAAGGCGCGCGATGATAGGTT | 1 | 1.53513e-05 |
| ACATGATTGGTCTGGGGGGTAAACCGCGTGATGATTAGAG | 1 | 1.53513e-05 |
| ACATGATTTCCGTGCAAAGTTTGGCCTGCAGATTTCTCGT | 1 | 1.53513e-05 |
| ACATGATTTGGCGTGTGTAAAAGGCTGCTGATCTGTGAAA | 1 | 1.53513e-05 |
| ACATGCAAAGTGGATTTGCTGTAGCGAACGTGGAACCAAG | 1 | 1.53513e-05 |
| ACATGCACAGACCTGAAGAATCCACGAGGTTTCCCAGTGC | 1 | 1.53513e-05 |
| ACATGCACCAGAACCGGAGGAGAGTGCCGGCATTCTTAGT | 1 | 1.53513e-05 |
| ACATGCACTATAGTGACGTTTTGAAGCAGGTAGAACCGCT | 1 | 1.53513e-05 |
| ACATGCAGGCAATGATGTTCACGGGTGGTTGGAGGTTTAC | 1 | 1.53513e-05 |
| ACATGCAGTGGGGAGAACTCTTGAGTTAAGTGGTGTTGTT | 1 | 1.53513e-05 |
| ACATGCCATCCCAGCGCGGTTTGGCTTAGTAAGGTTCACG | 1 | 1.53513e-05 |
| ACATGCGCGGTGGGGCAATGAAGGATCGTGGATCTGCATT | 1 | 1.53513e-05 |
| ACATGCGCTGTTTCGGAGTGTGTGGGGAGAGGCGGTAGGG | 1 | 1.53513e-05 |
| ACATGCGGGATTATAGCGTGTTGCAACGTCAGTAGTAGAC | 1 | 1.53513e-05 |
| ACATGCGGGGGTGTAGGCAGAGCCATCGTGAACGTGACCA | 1 | 1.53513e-05 |
| ACATGCGTCGTGGGCGATTACACAGAACGCTCATGATCAA | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.