These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACATGCGTGGAGCGCTGCCACGCGCTTGACGGTCCCACCT | 1 | 1.53513e-05 |
| ACATGCGTGTTGTTTGGTTATTTTATTGTAAAGTGGGTCT | 1 | 1.53513e-05 |
| ACATGCTATGAATGCGTCAGGGCACGTGGGCCATTTTGTT | 1 | 1.53513e-05 |
| ACATGCTCTGGCATGACCGTGATATTTGGTTGGGAGCGGT | 1 | 1.53513e-05 |
| ACATGCTGATGCCTTGGTTGGTTGCGCCGTTGGGGGTAGC | 1 | 1.53513e-05 |
| ACATGCTGGCCGACTCATGTTAAATCCCGGGCAGAGGTAT | 2 | 3.07026e-05 |
| ACATGCTGGGACGGAGTGGGGCCACGCTTAGGCGATGAGG | 1 | 1.53513e-05 |
| ACATGGAAAGCCTCGGTAAGATCGCGGTGGCATGGACAGA | 1 | 1.53513e-05 |
| ACATGGAAGGGGGATCGATAAAAGGTGCGGGGACCCCCCG | 1 | 1.53513e-05 |
| ACATGGAGAAATCCGCGGAGCGCTACATCCAGTGGGTGGT | 1 | 1.53513e-05 |
| ACATGGATCTTCTGAACTGATTCTATTAAGCAATGCCAAG | 1 | 1.53513e-05 |
| ACATGGCAAGCCAGCGCAGTGTGGGTTTAGTGGTATGCGT | 1 | 1.53513e-05 |
| ACATGGCAAGGCACGGCTTAGAAGAGGTAAGGGAGTAGGT | 1 | 1.53513e-05 |
| ACATGGCACGCGTGTTTAGGGTGTCAGTGGCTGTGTTGTT | 1 | 1.53513e-05 |
| ACATGGCCGCGTGTATTTCTTTTCTTTGGATGTCTTTCGC | 2 | 3.07026e-05 |
| ACATGGGACAACGGAGGGTTGTCGGGTGGGCGGCGGCGAC | 1 | 1.53513e-05 |
| ACATGGGAGGGTGCTAGGGGACGGCCAACTAGGCCCTTGT | 1 | 1.53513e-05 |
| ACATGGGGAAGTAGGGCGTAAGTAACCGTCTTTGCGTGGC | 1 | 1.53513e-05 |
| ACATGGGGACATGTCCCGACAAATGGATTGTCTCGGGGCG | 1 | 1.53513e-05 |
| ACATGGGGCCACAGAGCACGGATGTATATGTGGCTAGGGC | 1 | 1.53513e-05 |
| ACATGGGGTCCGGCCTGGAATACGTGGACGTCGCGGTGCA | 1 | 1.53513e-05 |
| ACATGGGGTGCTACGGAATAGGGGAGTGCCTCCTGGTAGG | 1 | 1.53513e-05 |
| ACATGGGTCCTTGGCGATGTGGAGTACTTTCGTGATATTG | 1 | 1.53513e-05 |
| ACATGGGTCTCGTAGTAACGGACTATGCTGAGTGCCTGGC | 1 | 1.53513e-05 |
| ACATGGGTTAATCGTGGATCAGTATCTCGGGACGTGCATC | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.