These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACCAACAGTCGCGGTCTTGCGGGCGGGTTAGTGTGCACTT | 2 | 3.07026e-05 |
| ACCAACCGTGAGAATTCAGTTCCGATCGTGGACGCGCCCG | 1 | 1.53513e-05 |
| ACCAACGAGTTAGGCTCTTGTCTATGGATAGGAGGGTGTG | 1 | 1.53513e-05 |
| ACCAACGGGAAAGTGGAAATCCTAGGAAGTTTTACTGTTA | 1 | 1.53513e-05 |
| ACCAACTGTGGTTGCTTTAATGTGTAAGATTCCAGTGGGC | 1 | 1.53513e-05 |
| ACCAACTTTTGTGTACGGGTCCTTATCACGTAGTGAGGGG | 1 | 1.53513e-05 |
| ACCAAGAACTATGTTCGAAGTTCGACGCCGTGACAATAGG | 1 | 1.53513e-05 |
| ACCAAGAAGGTTACGTTGCGGGTGGTTGTTCATGGTAGAC | 1 | 1.53513e-05 |
| ACCAAGACAGGGGGAAATTCACGTTCGTGGGGAAGAGACA | 1 | 1.53513e-05 |
| ACCAAGACCACAGCTGTAGCGTCTTAATTGGGGGCACGTT | 1 | 1.53513e-05 |
| ACCAAGACCCATGCCACAAGCCGGACTAGTGAGAGGAAGA | 1 | 1.53513e-05 |
| ACCAAGAGCGCTTATCAACGTGGAATCTACGTAAAACGAA | 1 | 1.53513e-05 |
| ACCAAGAGCGGAAGGGCCGGCTGTGTTTCTCGTGGGCTGA | 1 | 1.53513e-05 |
| ACCAAGGATTTTCTCGCGTGACCGCCAACCGTTGTACTTA | 1 | 1.53513e-05 |
| ACCAAGGCGTGGCGATATTACCGAGTGGGTCTTTGTCGGG | 1 | 1.53513e-05 |
| ACCAAGTGAACCCGCAGTTAACGGGTTTTGAGGCTTCAGG | 1 | 1.53513e-05 |
| ACCAAGTGTTGGACATCGATGTTTGCAAGCCGGGGCTCCC | 1 | 1.53513e-05 |
| ACCAATGTTCGTGGGTTTGGGAAGTGGACTTAGGCGTTGA | 2 | 3.07026e-05 |
| ACCAATGTTGGTGCATAAGCGTTGGTGGGTAGGAAAGTGC | 1 | 1.53513e-05 |
| ACCAATTAATTTGCGTGGGATGTTCGGCTGACGAATGCAT | 1 | 1.53513e-05 |
| ACCAATTTATAGAGCGCAGCACAGCAGAGGCGCGTGGGGT | 1 | 1.53513e-05 |
| ACCAATTTTTGTTTTATTTCGTAAGGGACGTGGGTCCTTC | 1 | 1.53513e-05 |
| ACCACAATGGATGGCCCAGGGCTTCATCTGGGGGGTCTGA | 1 | 1.53513e-05 |
| ACCACACAGTATAGGTCGTGTAGTGTGAGGATGGCTGCGT | 1 | 1.53513e-05 |
| ACCACAGCTGATAAATGCGTGTCACAGGTCGGTATTTCGT | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.