These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016774
BEND3-d4_CC40NCGTTTTYWCA1
- Reads
- 65,141
- Distinct strings in file
- 64,128
- File size
- 0.8 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016774
- Sample:
- SAMEA12312959
- SHA-256
- c9ae91f2001da64175d0eb53b23c4f7856faabce7b3c085a6f5721ee38efb32b
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| ACCACAGGGTCCGGAGTGTACAATATGCGGGGGAACTACT | 1 | 1.53513e-05 |
| ACCACATACGAATGCGAGCTAGATGCGTGTGGATAATAGC | 1 | 1.53513e-05 |
| ACCACATCATTTTGGTGGATTAACGATCTTCCGTGGCCCT | 1 | 1.53513e-05 |
| ACCACATCTAGTGTGGACGACTGTTATGTGTTGCTGTTAG | 1 | 1.53513e-05 |
| ACCACATGTATTCGTACAAGAGTGTGTCACGTGTGATTCG | 1 | 1.53513e-05 |
| ACCACATTTACCCAGACCCGGTGGGACGTCGTCAGGGGAT | 1 | 1.53513e-05 |
| ACCACCACGGGTGGGCCGGCTGAGACTTGATCGCTCCAGA | 1 | 1.53513e-05 |
| ACCACCACGTGCTGAGGCGTTTGCCACGCGGGTGTCTCTG | 1 | 1.53513e-05 |
| ACCACCGGGTGCACAGCGTGGGGGTAATTTGAAAGTCGTG | 1 | 1.53513e-05 |
| ACCACCGTGACCCCCATTTAGACGAGATAGCAGCTTAGGA | 1 | 1.53513e-05 |
| ACCACCTATAATGTGGGACTCGCAGTTTACGTGGGCTACC | 1 | 1.53513e-05 |
| ACCACCTATATTAAGAACCAGCTTCTGATATCACGGTCCG | 1 | 1.53513e-05 |
| ACCACCTCCAGGCCTGGTCCGTGAGATATCAGATCACCAG | 1 | 1.53513e-05 |
| ACCACCTTAGTAGACGTGTAGGAGGCGCTTCGGATAAGGG | 1 | 1.53513e-05 |
| ACCACGATCACCTTTGTGTTCACACTGTCGGGCTGAACTC | 1 | 1.53513e-05 |
| ACCACGCACAGAGTAAGTAAAGCGTGATGGGTTTTTGGGG | 2 | 3.07026e-05 |
| ACCACGCAGGTTACCGCCGTTTTTGTGTGACGCTTTCGAG | 1 | 1.53513e-05 |
| ACCACGCCGATTCCTGTCTAGTGCGTGGTGCGCGCTCGTG | 1 | 1.53513e-05 |
| ACCACGCGCCTGTGGATTTAAGCGAGTGGAGGGTTTGACG | 1 | 1.53513e-05 |
| ACCACGCGCGACCAGGTGCAGTCACGCACCCTGCTATATT | 2 | 3.07026e-05 |
| ACCACGCGCTTATCGGCAACAAATGCACGTAGGGTTCGTA | 1 | 1.53513e-05 |
| ACCACGCGTGGACTGAGTTTGGGGGACGATGCCGGAGGTG | 1 | 1.53513e-05 |
| ACCACGCTAGTGTATGGCCGCGGAGGGGTAAAGAAGGGAG | 1 | 1.53513e-05 |
| ACCACGCTGCAGTGTGAGCCGTGTGGACCATAGCTATGAG | 1 | 1.53513e-05 |
| ACCACGGAGAGTGTATGGTAACCGTGGGTTGTTGTAGTCG | 1 | 1.53513e-05 |
Read fractions use all reads in this source file as the denominator.