P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972373

RV28_s

Reads
4,798,053
Distinct strings in file
4,663,644
File size
27.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972373
Sample:
SAMEA13183956
SHA-256
c7f50fd346c75047e584676762e14063fa2488852abaa9bcd73c0d8ab32e8e6a

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTTACATGGAGATTA12.08418e-07
AAAAAAGTTACCCATGCCTAG12.08418e-07
AAAAAAGTTACGTAATATTCC12.08418e-07
AAAAAAGTTACGTAATATTCT12.08418e-07
AAAAAAGTTAGATTACCCACG12.08418e-07
AAAAAAGTTAGCCCTACCGTA12.08418e-07
AAAAAAGTTAGCTATGCAAAG12.08418e-07
AAAAAAGTTAGGTAGTGTTCG12.08418e-07
AAAAAAGTTAGTGTTGTCTCA12.08418e-07
AAAAAAGTTAGTTATGTCTTG24.16836e-07
AAAAAAGTTATACTTTCATAA12.08418e-07
AAAAAAGTTATCATGCAGGTA12.08418e-07
AAAAAAGTTATGCGTATTGAA12.08418e-07
AAAAAAGTTATTCTAAAAGCA12.08418e-07
AAAAAAGTTATTTTGGGGTTT12.08418e-07
AAAAAAGTTCAAAAGCTACAA12.08418e-07
AAAAAAGTTCACAATTGATAA12.08418e-07
AAAAAAGTTCACCACCCAGCC12.08418e-07
AAAAAAGTTCATATTTACGAC24.16836e-07
AAAAAAGTTCATCACTGGCAA12.08418e-07
AAAAAAGTTCCACATTAGTCG12.08418e-07
AAAAAAGTTCCCGTTATAAAA12.08418e-07
AAAAAAGTTCCTATCTACATG12.08418e-07
AAAAAAGTTCCTCTCTACATT12.08418e-07
AAAAAAGTTCTATGAGCAACA12.08418e-07

Read fractions use all reads in this source file as the denominator.