P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR8972373

RV28_s

Reads
4,798,053
Distinct strings in file
4,663,644
File size
27.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51212
Archive record:
ERR8972373
Sample:
SAMEA13183956
SHA-256
c7f50fd346c75047e584676762e14063fa2488852abaa9bcd73c0d8ab32e8e6a

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTTCTCATAATCAAG12.08418e-07
AAAAAAGTTCTGTCACTTTAT12.08418e-07
AAAAAAGTTCTTCCGGTCTTA12.08418e-07
AAAAAAGTTCTTCCGGTCTTG12.08418e-07
AAAAAAGTTCTTTTTTAGGAG12.08418e-07
AAAAAAGTTGAACGTTAACTA12.08418e-07
AAAAAAGTTGATTCTGTCGTT12.08418e-07
AAAAAAGTTGCAACACAAACA12.08418e-07
AAAAAAGTTGCACTAATTCGA12.08418e-07
AAAAAAGTTGGAAGGCGAGCG12.08418e-07
AAAAAAGTTGGTCTAGTATGA12.08418e-07
AAAAAAGTTGGTTATAACTAT12.08418e-07
AAAAAAGTTGTCATAGTGTGC12.08418e-07
AAAAAAGTTGTTTTATTATCG24.16836e-07
AAAAAAGTTTAAATTTTAGTG12.08418e-07
AAAAAAGTTTAACAAGCTAAT12.08418e-07
AAAAAAGTTTAACCGCAACGA12.08418e-07
AAAAAAGTTTAATAGGAATTT12.08418e-07
AAAAAAGTTTACACATTGAAA12.08418e-07
AAAAAAGTTTACTCGCACAGG12.08418e-07
AAAAAAGTTTAGCTTTATTAG12.08418e-07
AAAAAAGTTTAGTTGAACAAG12.08418e-07
AAAAAAGTTTATAACGTTAAA12.08418e-07
AAAAAAGTTTATAATACACTT12.08418e-07
AAAAAAGTTTATTACGGAATA12.08418e-07

Read fractions use all reads in this source file as the denominator.