These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATATAACTAAGTTATGGA | 1 | 3.70204e-06 |
| AAAATATAACTTGAATATGAA | 1 | 3.70204e-06 |
| AAAATATAAGAGCTCTTAAAA | 1 | 3.70204e-06 |
| AAAATATAAGTAAGTATAAGA | 1 | 3.70204e-06 |
| AAAATATAATAACTAAATATA | 1 | 3.70204e-06 |
| AAAATATAATATATTACTCAA | 1 | 3.70204e-06 |
| AAAATATAATATTAAACCTAA | 1 | 3.70204e-06 |
| AAAATATAATATTTAATATTA | 2 | 7.40409e-06 |
| AAAATATAATCAATATTCTCA | 1 | 3.70204e-06 |
| AAAATATAATCGTTAATACTA | 1 | 3.70204e-06 |
| AAAATATAATTCAAGAAGATA | 1 | 3.70204e-06 |
| AAAATATAATTGTATAACTGA | 1 | 3.70204e-06 |
| AAAATATAATTTTCATAATTA | 1 | 3.70204e-06 |
| AAAATATACAATTCATTGAGA | 1 | 3.70204e-06 |
| AAAATATACATTCTCTGATAA | 1 | 3.70204e-06 |
| AAAATATACCTGGTTAATATA | 1 | 3.70204e-06 |
| AAAATATACTACTATGGAGTA | 1 | 3.70204e-06 |
| AAAATATAGAGTATGATCTTA | 1 | 3.70204e-06 |
| AAAATATAGATGAGTTACATA | 1 | 3.70204e-06 |
| AAAATATATAAAATTTATAGA | 1 | 3.70204e-06 |
| AAAATATATAAATAATAATCA | 1 | 3.70204e-06 |
| AAAATATATAATATTTATATA | 1 | 3.70204e-06 |
| AAAATATATAATTATTATATA | 2 | 7.40409e-06 |
| AAAATATATAATTTATATCGA | 1 | 3.70204e-06 |
| AAAATATATACAATAAGATCA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.