These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATATATACTCTGGGAAAA | 1 | 3.70204e-06 |
| AAAATATATATCATAAATATA | 1 | 3.70204e-06 |
| AAAATATATATTGCGGATATA | 1 | 3.70204e-06 |
| AAAATATATATTGTATTTATA | 1 | 3.70204e-06 |
| AAAATATATATTTAATAATCA | 2 | 7.40409e-06 |
| AAAATATATATTTAATATCGA | 1 | 3.70204e-06 |
| AAAATATATATTTATACAATA | 1 | 3.70204e-06 |
| AAAATATATATTTATATTTAA | 1 | 3.70204e-06 |
| AAAATATATATTTATGAGCAA | 1 | 3.70204e-06 |
| AAAATATATATTTCAATATAA | 1 | 3.70204e-06 |
| AAAATATATATTTGAACGCAA | 1 | 3.70204e-06 |
| AAAATATATATTTTATTTATA | 2 | 7.40409e-06 |
| AAAATATATATTTTGTATATA | 1 | 3.70204e-06 |
| AAAATATATATTTTTTTCATA | 1 | 3.70204e-06 |
| AAAATATATCATTTCACGTCA | 1 | 3.70204e-06 |
| AAAATATATCCTATTTTAATA | 1 | 3.70204e-06 |
| AAAATATATCGTTAAAATATA | 1 | 3.70204e-06 |
| AAAATATATGGAGAGTAAATA | 1 | 3.70204e-06 |
| AAAATATATGTTTACCTGAGA | 1 | 3.70204e-06 |
| AAAATATATTTCTTTTGTATA | 1 | 3.70204e-06 |
| AAAATATATTTTAAAAATATA | 1 | 3.70204e-06 |
| AAAATATATTTTAAAATTTCA | 1 | 3.70204e-06 |
| AAAATATATTTTTATTAATTA | 1 | 3.70204e-06 |
| AAAATATCAAACAGATTCAGA | 1 | 3.70204e-06 |
| AAAATATCAACCATTATAATA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.