These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATGTTTTACAGGTACTAA | 1 | 3.70204e-06 |
| AAAATGTTTTCATTACTGAAA | 1 | 3.70204e-06 |
| AAAATGTTTTCTATATTCTTA | 1 | 3.70204e-06 |
| AAAATTAAAAAAATTATATAA | 1 | 3.70204e-06 |
| AAAATTAAAAATTATAATTTA | 1 | 3.70204e-06 |
| AAAATTAAAACACTTAAGGTA | 1 | 3.70204e-06 |
| AAAATTAAAATATTATAGAGA | 2 | 7.40409e-06 |
| AAAATTAAACTGATTCTCAGA | 1 | 3.70204e-06 |
| AAAATTAAAGACTATCTTTAA | 2 | 7.40409e-06 |
| AAAATTAAAGGTATATTCAAA | 1 | 3.70204e-06 |
| AAAATTAAAGTGCACTCCGTA | 1 | 3.70204e-06 |
| AAAATTAAATAACTTAAGGAA | 1 | 3.70204e-06 |
| AAAATTAAATTATATCAGTAA | 1 | 3.70204e-06 |
| AAAATTAAATTCTAGTAATAA | 1 | 3.70204e-06 |
| AAAATTAACTACATTCATATA | 1 | 3.70204e-06 |
| AAAATTAACTTTAGATCGGTA | 1 | 3.70204e-06 |
| AAAATTAAGTAAATCTATTGA | 1 | 3.70204e-06 |
| AAAATTAAGTAATTAGAAGGA | 1 | 3.70204e-06 |
| AAAATTAAGTAATTTTAGAGA | 1 | 3.70204e-06 |
| AAAATTAAGTACTCAATAATA | 1 | 3.70204e-06 |
| AAAATTAAGTTCTTATCTCCA | 1 | 3.70204e-06 |
| AAAATTAATAAAATTTTAATA | 1 | 3.70204e-06 |
| AAAATTAATAACCTACTAATA | 1 | 3.70204e-06 |
| AAAATTAATAATATTATTAAA | 1 | 3.70204e-06 |
| AAAATTAATAATCATAAATAA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.