These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATTAATAATTAATAAAAA | 1 | 3.70204e-06 |
| AAAATTAATAATTAATAATAA | 2 | 7.40409e-06 |
| AAAATTAATAATTAATGAAGA | 1 | 3.70204e-06 |
| AAAATTAATAATTCATAACGA | 2 | 7.40409e-06 |
| AAAATTAATAATTTATGCTCA | 1 | 3.70204e-06 |
| AAAATTAATACTTAATATTAA | 1 | 3.70204e-06 |
| AAAATTAATAGATACTATTAA | 1 | 3.70204e-06 |
| AAAATTAATAGTAATGATGAG | 1 | 3.70204e-06 |
| AAAATTAATATCATTGTATTA | 1 | 3.70204e-06 |
| AAAATTAATATTAATATAATA | 1 | 3.70204e-06 |
| AAAATTAATATTACATTAATA | 1 | 3.70204e-06 |
| AAAATTAATATTCATAACTCA | 1 | 3.70204e-06 |
| AAAATTAATATTCTAAAAAGA | 1 | 3.70204e-06 |
| AAAATTAATATTTAATAAACA | 1 | 3.70204e-06 |
| AAAATTAATATTTAATATCTA | 2 | 7.40409e-06 |
| AAAATTAATATTTACAATACA | 1 | 3.70204e-06 |
| AAAATTAATATTTTATATGAA | 1 | 3.70204e-06 |
| AAAATTAATATTTTCATATTA | 1 | 3.70204e-06 |
| AAAATTAATCTTAAATATATA | 1 | 3.70204e-06 |
| AAAATTAATCTTTCCATAGAA | 1 | 3.70204e-06 |
| AAAATTAATGACCTAAACTAA | 1 | 3.70204e-06 |
| AAAATTAATGGAACTATGCTA | 1 | 3.70204e-06 |
| AAAATTAATTACAAACCATTA | 1 | 3.70204e-06 |
| AAAATTAATTATATAATAATA | 1 | 3.70204e-06 |
| AAAATTAATTCCTTCATTCTA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.