These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATTATATTATATCATTCA | 1 | 3.70204e-06 |
| AAAATTATATTCAAGATCATA | 1 | 3.70204e-06 |
| AAAATTATATTCTGATAGGTA | 1 | 3.70204e-06 |
| AAAATTATATTTAATAATTAA | 2 | 7.40409e-06 |
| AAAATTATATTTAATAATTCA | 1 | 3.70204e-06 |
| AAAATTATATTTTGTTATAAA | 1 | 3.70204e-06 |
| AAAATTATATTTTTATTAATA | 1 | 3.70204e-06 |
| AAAATTATCCAAACTTACAAA | 1 | 3.70204e-06 |
| AAAATTATCCACCTATATAAA | 1 | 3.70204e-06 |
| AAAATTATCCATACATCGTAA | 1 | 3.70204e-06 |
| AAAATTATCCGGGTAATCTGA | 1 | 3.70204e-06 |
| AAAATTATCTAAAAAATAAAA | 1 | 3.70204e-06 |
| AAAATTATCTTTATTATTTTA | 1 | 3.70204e-06 |
| AAAATTATGATAGGTATATAA | 1 | 3.70204e-06 |
| AAAATTATGATTATGTTTATA | 1 | 3.70204e-06 |
| AAAATTATGGTGTATAGTCAA | 1 | 3.70204e-06 |
| AAAATTATGTATATGCACTCA | 1 | 3.70204e-06 |
| AAAATTATGTCCTAATTAAAA | 1 | 3.70204e-06 |
| AAAATTATTAAAATAAATTAA | 1 | 3.70204e-06 |
| AAAATTATTAAATATATATCA | 1 | 3.70204e-06 |
| AAAATTATTAAGAAGTAGCAA | 1 | 3.70204e-06 |
| AAAATTATTAATAAATCTTAA | 1 | 3.70204e-06 |
| AAAATTATTAATTTCCGCATA | 1 | 3.70204e-06 |
| AAAATTATTACATCACCGGTA | 1 | 3.70204e-06 |
| AAAATTATTACCCTCCTATAA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.