These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATTATTAGAACTCTTTAA | 1 | 3.70204e-06 |
| AAAATTATTATAAATATATTA | 1 | 3.70204e-06 |
| AAAATTATTATATCCATAAAA | 1 | 3.70204e-06 |
| AAAATTATTATATTATGTATA | 1 | 3.70204e-06 |
| AAAATTATTCAAGAGTGGAGA | 1 | 3.70204e-06 |
| AAAATTATTCATCACTTATTA | 1 | 3.70204e-06 |
| AAAATTATTCTAATTGACCCA | 1 | 3.70204e-06 |
| AAAATTATTCTACTGAGTTAA | 1 | 3.70204e-06 |
| AAAATTATTCTATCTAGAGGA | 1 | 3.70204e-06 |
| AAAATTATTCTATGTACACTA | 1 | 3.70204e-06 |
| AAAATTATTCTCTGTTTCATA | 1 | 3.70204e-06 |
| AAAATTATTCTTCTTTGCGTA | 1 | 3.70204e-06 |
| AAAATTATTGGTGTTCTAGGA | 1 | 3.70204e-06 |
| AAAATTATTTATTTAGCATCA | 1 | 3.70204e-06 |
| AAAATTATTTCATATTTCATA | 1 | 3.70204e-06 |
| AAAATTATTTCCCATTATTGA | 1 | 3.70204e-06 |
| AAAATTATTTCGATAATCTGA | 1 | 3.70204e-06 |
| AAAATTATTTTAGGGATTACA | 1 | 3.70204e-06 |
| AAAATTATTTTATAGACCTTA | 1 | 3.70204e-06 |
| AAAATTATTTTCTGTCCAATA | 1 | 3.70204e-06 |
| AAAATTATTTTGGATATGAAA | 1 | 3.70204e-06 |
| AAAATTATTTTTCTTAAAAAA | 1 | 3.70204e-06 |
| AAAATTCAAATTTATTTCTAA | 1 | 3.70204e-06 |
| AAAATTCAAGTCAGCATTGGA | 1 | 3.70204e-06 |
| AAAATTCACATCTAGCTTATA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.