These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATATAATATTTAATAATCA | 1 | 3.70204e-06 |
| AAATATAATATTTATAAGCAA | 1 | 3.70204e-06 |
| AAATATAATATTTCATTTATA | 1 | 3.70204e-06 |
| AAATATAATCTTTCTTATATA | 1 | 3.70204e-06 |
| AAATATAATGAGAAATAATAA | 1 | 3.70204e-06 |
| AAATATAATTAATTTTTTGTA | 1 | 3.70204e-06 |
| AAATATAATTACATAATAATA | 1 | 3.70204e-06 |
| AAATATAATTATTGTGTGAGA | 1 | 3.70204e-06 |
| AAATATAATTGTGTCTTATAA | 1 | 3.70204e-06 |
| AAATATAATTTATGATTTAAA | 1 | 3.70204e-06 |
| AAATATAATTTTAATATATAA | 1 | 3.70204e-06 |
| AAATATAATTTTTATTTTATA | 1 | 3.70204e-06 |
| AAATATAATTTTTGGGAAGAA | 1 | 3.70204e-06 |
| AAATATAATTTTTTCATCTGA | 1 | 3.70204e-06 |
| AAATATACAACAGTTATATTA | 1 | 3.70204e-06 |
| AAATATACAATCAGAGTTCAA | 1 | 3.70204e-06 |
| AAATATACAATCTGAGTTGAA | 1 | 3.70204e-06 |
| AAATATACAATGTGTTCAAAA | 1 | 3.70204e-06 |
| AAATATACACTACATAAGAGA | 1 | 3.70204e-06 |
| AAATATACATATTCGTTCTGA | 1 | 3.70204e-06 |
| AAATATACATGATCTCATGTA | 1 | 3.70204e-06 |
| AAATATACCACGCGAGTCCGA | 1 | 3.70204e-06 |
| AAATATACCCGAAACACTATA | 1 | 3.70204e-06 |
| AAATATACCTTACGTATGCTA | 1 | 3.70204e-06 |
| AAATATACGATAGTATATCGG | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.