These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATATACTAACTTATAAATA | 1 | 3.70204e-06 |
| AAATATACTAGGCATCATTAA | 1 | 3.70204e-06 |
| AAATATACTCATATAGTAATA | 1 | 3.70204e-06 |
| AAATATACTGGATTATTAAGA | 1 | 3.70204e-06 |
| AAATATACTTATTATTTATAA | 1 | 3.70204e-06 |
| AAATATACTTTCTAGGCAATA | 1 | 3.70204e-06 |
| AAATATACTTTTAGGAGCATA | 2 | 7.40409e-06 |
| AAATATAGAAATTACAATGAA | 1 | 3.70204e-06 |
| AAATATAGATATTTATATAAA | 1 | 3.70204e-06 |
| AAATATAGATTCGCTTATTAA | 1 | 3.70204e-06 |
| AAATATAGCTTAATCATATAA | 1 | 3.70204e-06 |
| AAATATAGGATAATTCCCGCA | 1 | 3.70204e-06 |
| AAATATAGTTAGATAAGTTTA | 1 | 3.70204e-06 |
| AAATATAGTTTATGTTATAAA | 1 | 3.70204e-06 |
| AAATATAGTTTCTTTGTTATA | 1 | 3.70204e-06 |
| AAATATAGTTTCTTTTGCGAA | 1 | 3.70204e-06 |
| AAATATATAAAATTTATATAA | 1 | 3.70204e-06 |
| AAATATATAAATAATATCAAA | 1 | 3.70204e-06 |
| AAATATATAAATATTAATAAA | 1 | 3.70204e-06 |
| AAATATATAAATTATATATAA | 1 | 3.70204e-06 |
| AAATATATAAGAAAATTATAA | 1 | 3.70204e-06 |
| AAATATATAAGAGTAGGAATA | 1 | 3.70204e-06 |
| AAATATATAAGCTTCTATATA | 1 | 3.70204e-06 |
| AAATATATAAGGCATAGTATA | 1 | 3.70204e-06 |
| AAATATATAATAACATGTATA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.