P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGGTATGGGCTCGAGTA12.8851e-06
AAAAGGGTATTTCTATCCATA12.8851e-06
AAAAGGGTTAACTGAGGTTAA12.8851e-06
AAAAGGGTTCGTAATGTATAA12.8851e-06
AAAAGGGTTCTCGTGAAAGGA12.8851e-06
AAAAGGGTTTATAATTTATAA12.8851e-06
AAAAGGTAAAGAGCAATAATA12.8851e-06
AAAAGGTAAGTATATTAAATA12.8851e-06
AAAAGGTACGACTGTTCTAAA12.8851e-06
AAAAGGTACTATACATTTAGA12.8851e-06
AAAAGGTAGGTCCCTTGAAAA12.8851e-06
AAAAGGTAGTCTTCAATATCA12.8851e-06
AAAAGGTATATGCAATAACTA12.8851e-06
AAAAGGTATCTAATTCTCCAA12.8851e-06
AAAAGGTATGTGAGGAAGGGA12.8851e-06
AAAAGGTCAATTATACAAGGA12.8851e-06
AAAAGGTCATGAATGGTTTGA12.8851e-06
AAAAGGTCTCTTATTCTATCA12.8851e-06
AAAAGGTCTTAAATGGAGACA12.8851e-06
AAAAGGTCTTACCACCAGTAA12.8851e-06
AAAAGGTGGGGCTCCAAGGGA12.8851e-06
AAAAGGTGTGATATGAACAAA12.8851e-06
AAAAGGTGTTATAGGGTTGTA12.8851e-06
AAAAGGTTAATGTAAATCACA12.8851e-06
AAAAGGTTACGGGAGATGGAA12.8851e-06

Read fractions use all reads in this source file as the denominator.