P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGTTAGGAACTTCTTAA12.8851e-06
AAAAGGTTCCTCGCAAATAAA12.8851e-06
AAAAGGTTCTATTGCTTAGTA12.8851e-06
AAAAGGTTGAGTGTAGGGTCA12.8851e-06
AAAAGGTTGATTAGACTATCA12.8851e-06
AAAAGGTTGCCCATTACTTGA12.8851e-06
AAAAGGTTGCTCTAGAGAGTA12.8851e-06
AAAAGGTTGTTTTCAAAGCAG12.8851e-06
AAAAGGTTTAACTCTATCGAA12.8851e-06
AAAAGGTTTAACTGCCGATGA12.8851e-06
AAAAGGTTTATGAGTAGGAGA12.8851e-06
AAAAGGTTTCATTAATCCTCA12.8851e-06
AAAAGGTTTCGTATCGCTATA12.8851e-06
AAAAGGTTTCTATGATTAGAA12.8851e-06
AAAAGGTTTGTGAAAATTTAA12.8851e-06
AAAAGGTTTTCATCTTACTGA12.8851e-06
AAAAGGTTTTGAGTCAGGGAG12.8851e-06
AAAAGTAAAAAAAATATCATA12.8851e-06
AAAAGTAAAAAAGGGTATGGA12.8851e-06
AAAAGTAAAATCATACTCAGA12.8851e-06
AAAAGTAAAATGCTAGATTCA12.8851e-06
AAAAGTAAACCGCGACGTTCA12.8851e-06
AAAAGTAAAGGTCTTACTACA12.8851e-06
AAAAGTAAAGTAGAGATTGGA12.8851e-06
AAAAGTAACATTGTATTCGAA12.8851e-06

Read fractions use all reads in this source file as the denominator.