LIN28A

LIN28A_GT40NGAAGTA_AAP_D_Cycle1; LIN28A_GT40NGAAGTA_AAP_D_Cycle2 · 4 runs in PRJEB47428

UniProt Q9H9Z2 ↗ BioProject PRJEB47428 ↗ JSON ↗

Organism

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Nucleic acid

RNA

Rounds available

R1,R2,R3,R4

Sequences indexed

10,000

Top enriched sequences

More via API →

Sequence	Length	log₂ FC	P(active)	Class	Monotonicity
CGAGAATGGCGCCTCATTGCGCACGAAATAATATTGTCTC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:8e7caf2d82aa	40	14.12	0.48	strong_positive	0.67
CCTGACGGTTGATGGGCGCATCCCATGCGTAACGATGACC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:452dedc7c2b9	40	13.90	0.54	strong_positive	0.67
ACGGGTTGATGTATCTGGTTAGCTACGCTCCTTGTAGCTC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:f40a95acebe7	40	13.81	0.54	strong_positive	0.33
CTAACAGTACCCACTTGGTACTACGCGATGTTATGTTGCG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:b2625d3819a8	40	13.64	0.55	strong_positive	0.67
TCATGCAGTTGCCACGCCTTGGCACATTATGTTGTAAGCA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:9a986e7785e4	40	13.64	0.55	positive	0.00
TCCTCGCTTGAAATGATGCTGGACGCCCTCATGGCGTCGC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:9251778dac0b	40	13.46	0.53	strong_positive	0.67
ACGTTCACGATGTAACTTGGTCGTGCACCTCACGACGAGA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:05970b803151	40	13.42	0.54	strong_positive	0.67
TTTATCGCGTTGCGCCATCTCGCGCGGTATCATGAACGAT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:5286cc918f34	40	13.29	0.55	positive	0.00
TCTCTAAGTTATCATGTGGTGTGGCCGTCTTGCCACGCTG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:038493a4d0fa	40	13.29	0.54	strong_positive	0.67
CGAATTACGGCCTACTTGCCGTGCAGTATCATGAAGGTTC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:397cc9e379ce	40	12.93	0.47	strong_positive	0.33
CGTCTGGGCCTCCTTGCCCATGTAATCATGTTGTTTTATC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:4fb2766a1658	40	12.93	0.54	strong_positive	0.33
AATTTCACTTTAGGGCACCTTCCCTATGTGATACGTTGTG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:68d2016d8379	40	12.93	0.52	positive	0.00
CGATGCGTGAAATCATGACGCTGGCCTCTACTTTAGGCTC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:b49d5f403979	40	12.87	0.52	strong_positive	0.67
TGGTGCAGCTTCACCTGTATACTCCGCGATAACATGTGCA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:08c0bfc96ff8	40	12.87	0.56	positive	0.00
ACGATATGGTGTTATTAATAATGGCATCTCCTTATGCCTT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:aa95b87fd320	40	12.87	0.54	strong_positive	0.67
TGAGCGATGTGATGCGACGAGCACTCCTTGCTCTAGCTCT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:82fbb2039de2	40	12.87	0.55	strong_positive	0.67
TTCCCTAAGCGCACCTCCTTGTGCGCGGTATAATGGGTGA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:a2406a0063d7	40	12.87	0.55	strong_positive	0.33
TTCGTGGGACGCCACCCTTTGGCTTCCCGGTGTGATGACG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:aa535612f803	40	12.81	0.55	strong_positive	0.33
GGCACCGTATGGGCTGCCTTGGTGTGCGCACATCGCACGA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:f67e3d0adc2f	40	12.81	0.55	strong_positive	0.33
AGTGTCGTTGTCGCGCCACCTGCGCGAGCGAAATCGTGAC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:4956ccc50028	40	12.81	0.52	strong_positive	0.67
CTTCTTGATTGGACACCTTTCCAATAATGTAATGCTAAGG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:bfbb3d2401e5	40	12.81	0.48	strong_positive	0.33
CCCTTCATTAGATATCATTGGGTGGGCACGCCTTGCCCGA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:e6915a0f7020	40	12.75	0.50	strong_positive	0.33
TTCGTAGCGGGGCACACCGTTGCCCGTTGTCTTAACGCAG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:77402877b987	40	12.75	0.55	positive	0.00
AATCGCCGCCTGCGCTTCAGGCGTTGATATAATGCTGTGC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:bc41be0dd735	40	12.75	0.55	strong_positive	0.33
GTGCACACGATATCAAACGGACCCTACTTGGTCCTGGCGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:1fc580437d9c	40	12.75	0.55	strong_positive	0.33
GCGTCCCTCCTTGGACGCGGATAAGAATGATGCTGTGTAC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:b84cc0687945	40	12.75	0.43	strong_positive	0.67
CTTCTGCTTTAACCACCTTGTTAAAGTCTGATGTAGTATG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:99eb9497f31d	40	12.68	0.45	positive	0.00
CGGGACCGGTCCAACTTGACCGCGTATGATGTTATGCTGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:dca44b9c0229	40	12.68	0.53	strong_positive	0.33
CGCAATGAGATTCCCTTAATCTCCATGATGTGACTGGCGC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:e964017da7a0	40	12.68	0.51	strong_positive	0.33
TTGCCCTAGGCTGACTCTCCTTAGTCATGATGTCTCACGG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:c52ff7fd78f8	40	12.68	0.56	strong_positive	0.33
AGCTGTTCGAGCCCTCCTTGGCTCGGTGTCATGTGTTAGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:84ac58d58635	40	12.68	0.56	strong_positive	0.33
ACCACTCGATCACCACCTTGTGATCTGAACTGTAATATGG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:ac9c9f2b39e3	40	12.68	0.54	strong_positive	0.33
ACAGGGGCTGATGTAACGCGCCCGTCCCTCCTTGGACCGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:7ce3aea7dce3	40	12.61	0.55	strong_positive	0.33
ACTTGCACGTTAGAATACGGTCGACCTCCATGTCGACGGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:1acc95dc0baa	40	12.61	0.54	positive	0.00
GCCGTATCATGTTTGCACCCTCCTTGGTGCAGGGTCGGAC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:e2877c8a6e1a	40	12.61	0.53	strong_positive	0.67
ATATCCCTATGGTCACGCCTTGACCGTATAATGTTCTTAG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:6e1b300876d9	40	12.61	0.55	strong_positive	0.67
GATCCGCTTGTATGATGTGGAGCGCTCCTTCGTTCCGTGC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:3e41afad96eb	40	12.61	0.55	strong_positive	0.67
TGCTTTCGTATCATAATAGTTAGGGCACCTTCCCTACTGC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:ab5ed26d27ca	40	12.61	0.51	positive	0.00
GTCTTCGTATAGTTGCGTCGCAGCTCCTTCTGCGTGGGGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:eff809fe3f7e	40	12.61	0.55	strong_positive	0.67
TCAAAGTTGCGGCCAACGTGCCGACGGTGTGTTAAACTTG PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:ceff07f9e4ef	40	12.61	0.39	strong_positive	0.33
CTTCAGTGGGGTCACTCCTTGACCACGGAACTATGATGAT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:9144dbf5e861	40	12.61	0.46	strong_positive	0.33
TCACCGTTTGGTTTCGCTTAAACCTGGTATCTCGTGTGGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:1d44447340e8	40	12.61	0.46	strong_positive	0.33
TGTCGCGGTATCATATGGAAGCATCGTCTTCCTGCGAAGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:8d44d7588596	40	12.54	0.50	strong_positive	0.67
TTCGCGATAATCTTATGAGGCACCTCCTTGTGCCTTGGAT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:5aba9a2d5c46	40	12.54	0.55	strong_positive	0.33
CTTGCGGGTTTGTTACTCACGCTAGTCGCCACTTGCGACA PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:19f7ef3974c6	40	12.54	0.54	strong_positive	0.67
GCTTTGGTAGGGCAAGCTCCTTCCTGCCCGTGTGTGATGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:2ce14b10d628	40	12.54	0.52	strong_positive	0.67
CATCAGGTTATGATGCGATAAGCCTCCTTGCTTATGTGAC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:20caa472b4c0	40	12.54	0.55	strong_positive	0.67
GCGCGGTGGTCGCCCTCTTGGCGAGCCGGTGTGTCGATAC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:d733081ccce1	40	12.54	0.55	strong_positive	0.33
GTTGCAAACCTCCTTGTTCGCGTTGATGATGTTATGTCTC PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:b5668e962967	40	12.54	0.54	strong_positive	0.33
GGTCTGCGATAAAACGGCGAGACGTGATTCACCTCCTTGT PANAPTA:Q9H9Z2:LIN28A:PRJEB47428:R4:b19ea5af830b	40	12.46	0.45	positive	0.00

SELEX rounds

R1 R2 R3 R4 ·final

Structural & language-model features

JSON ↗

Pre-computed feature catalog (paths only — files served separately).

Residues

209

FASTA

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ESM-2 mean

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ESM-2 per-residue

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