MSI2

MSI2_GG40NTAGTTT_AAN_D_Cycle1; MSI2_GG40NTAGTTT_AAN_D_Cycle2 · 4 runs in PRJEB47428

UniProt Q96DH6 ↗ BioProject PRJEB47428 ↗ JSON ↗

Organism

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Nucleic acid

RNA

Rounds available

R1,R2,R3,R4

Sequences indexed

10,000

Top enriched sequences

More via API →

Sequence	Length	log₂ FC	P(active)	Class	Monotonicity
GACCACAAGGCTAGTCCATTGTGGTGGCTAAAGGCTATAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:082eb1fac3f3	40	13.95	0.48	strong_positive	0.33
TTGGCAATCTACTAAAACTAACTAAGGTGCTGCCAAGAAG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:5f4dc500f129	40	13.68	0.69	positive	0.00
TTTGTATCTATGCGAGCTAATCTCACGTGACTAAGGTGGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:2dbbd1426ac0	40	13.18	0.65	strong_positive	0.33
GTTCGATCCAAGGCCTATTGCACGGATTGCTATTCTAGTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:1db92373a47c	40	13.00	0.41	strong_positive	0.33
GATAGGCGTTCAGACGTGTCGACTAACGTATTCTACATTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:1de3eab45b06	40	12.90	0.41	strong_positive	0.33
CTAATAAGCTAATTGCTAAGTCTAAATGTATACGTGCCAT PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:317a66db70b4	40	12.68	0.70	strong_positive	0.33
TCTATGCTGCTATGTGAGCTAAAACTAAAGTGCTAATGGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:106b5ca9ea30	40	12.68	0.70	strong_positive	0.33
TGCACGTGTCCTAATGACAAGTGGTGTTTGTGCTACTTAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:69a5e4b5e417	40	12.68	0.35	positive	0.00
TGGTGCTATTATACTAACTATCTAAGACAGCACGCGAAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:eb521dcc2918	40	12.68	0.69	strong_positive	0.33
CCAAGTGCCCTATTGACACGAGGCAGTGTGTTAACTACTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:b11af51cffc2	40	12.55	0.57	strong_positive	0.33
CTATTCTAAGTACTATCTAATGTGAATGTTGTAACGGCCG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:983f36303e53	40	12.55	0.61	strong_positive	0.33
CCTCGGCCTAATCTAGGTGGTGCCAAGGATCGTTGCTAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:5e59e977ac45	40	12.55	0.56	strong_positive	0.33
GACTAAGGCTAATTACTAACTAAGGTGGGTGGCAGGGACT PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:1e6bcf7f6c83	40	12.55	0.60	strong_positive	0.33
TTACTCTACGTCTAAGGTCTACGATCTACTGTTAAGGAGT PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:f300edaa3103	40	12.41	0.66	positive	0.00
TACACTATGGTGACGCTAATCGTCCCGCAGCAAGCTAATC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:9e92d55c6d5a	40	12.41	0.71	positive	0.00
ATTGCCTTAATGTTTGTCTACTATCTAATCTATGTTGGCC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:7d5170b3e228	40	12.41	0.58	strong_positive	0.33
TTACTTGCCACATCTAAGAGGACAAGTGTCTAACTCTAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:2deba48106c2	40	12.41	0.71	positive	0.00
CGACGCACAGCGACTACGTGCTATTTCTATGCTGTGTTCC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:e59ff17c4db5	40	12.26	0.66	strong_positive	0.33
ATGGGACATAAATCTACTAACTACGCTATGTCCCTCATGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:352c7d0e7cff	40	12.26	0.68	positive	0.00
GTGATGATTACTAAGAGACACTACTTGTCTATGACTAAGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:7cf46a07f41e	40	12.26	0.66	strong_positive	0.33
CTATGCTAATTTTGCTAAATCTAAGTGTGTGAGAATGGGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:dbdaf6a9a693	40	12.26	0.62	strong_positive	0.33
TACCTCAAGGCTATCTACGCTAATCTACGTTTAGAGGAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:58ee39c6017a	40	12.26	0.67	strong_positive	0.33
TGACGCTCAACTAAATCTAATACTAACTTGACCGTTTAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:02d84a6b35a6	40	12.09	0.70	strong_positive	0.33
TTGTCTATCTAAAAGTCTAATCTAAATGTTGATGGCTACG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:014774c736b9	40	12.09	0.68	strong_positive	0.33
TGTACTAATGTTGGGATGTGCAACGTTCTAAAGCTAATTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:fbd6be135e2d	40	12.09	0.52	positive	0.00
TGCATACCTACTAATGAAACTAACTAATGTACGCAGGTTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:831cd2b27c55	40	12.09	0.70	strong_positive	0.33
TACGTATCTATTCTAATATTCTTATTCTATGGGTGTAGCG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:51e5163cbf43	40	12.09	0.62	strong_positive	0.33
ATATGGAGACTGTCCTAAGTGACGCGTCTATATGCTACGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:fca128d61e43	40	12.09	0.64	strong_positive	0.33
ATTGGCAAGTCTAAACGAACTATCTAAGATGCCACCCTAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:99f08debadf2	40	12.09	0.72	strong_positive	0.33
CGTGTAGTTCGCTATTCGAAGTAACACGATACGGTATGTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:7111353fb441	40	11.90	0.17	positive	0.00
GAACTAAGCTATGAGCTAACTAGGTGGATGGAAGCAGGGG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:2554ed4be83a	40	11.90	0.40	strong_positive	0.33
CTAAGCTAACTACAAATAAACGAGCCCACTACGTACGGGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:274380a478cc	40	11.90	0.71	strong_positive	0.33
TGATGATTGCTATGTTTCTAAATGATTTGCTACTTGTTAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:8161dc41447a	40	11.90	0.14	positive	0.00
ATATTTACCACCATACGTCTAACTTGTGGTATGCTAAGTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:d36b66daa6b0	40	11.90	0.69	strong_positive	0.33
TCAACCTTGTGGACTAATATGGGTTGGAGCTACACTAAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:01df5f0b0056	40	11.90	0.44	strong_positive	0.33
TAACTGATTACTAAAACTATGAGGCTAATGCTATGTGTGG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:02350290c820	40	11.90	0.60	strong_positive	0.33
GAAGGCAATTTCGCTACTGATTATCGTTGCCGTGTCTAAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:184c5a3dfcb2	40	11.90	0.27	strong_positive	0.33
TGGGATCAGTGGCTAAGTTGCTAACTATATCTACATTGCC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:e69cc93a6c10	40	11.90	0.57	positive	0.00
TGGGAGCTACTATCTAATGCTATGGGATGGTTTCGTTGCC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:589ba49d06bc	40	11.90	0.38	strong_positive	0.33
TAACGTGCCCGCTAGTCGGCTGTACACGTTGCTAAGAACC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:32c65249627f	40	11.90	0.41	strong_positive	0.33
CGTTGTGGAAAAATACTACGTTCCACGCTAAAAGCTAGAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:c763eac83603	40	11.90	0.50	strong_positive	0.33
GTAACTACGATATCTAGTATACTAAGCTAATGTGGGCAGG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:726a0c747395	40	11.90	0.68	strong_positive	0.33
TATTTGTTGGCTTATCTAGAGCACAATCGCTAATCTAATC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:582ec0cc36c3	40	11.90	0.58	strong_positive	0.33
TGGGGTCGGTTGCCCGCCTAGTGCGGGAACACGCTAAGTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:8c3c6ebcc0ac	40	11.90	0.19	strong_positive	0.33
CGGGACACGCTATTCTACGTCTCTAATGCTGTGCCGTTAC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:5fcc85d604d7	40	11.90	0.64	strong_positive	0.33
GCTTGGGCCGCTATGCTAATGGTTACTACGTATCTAAGGT PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:62b9f2aa566a	40	11.90	0.55	strong_positive	0.33
CTATGCTGCGAACTATCTACTCTATTTTCTAATGGCAGCG PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:2ad4bab6609f	40	11.90	0.68	strong_positive	0.33
ACTATGTTGTCTAATCTAGGACTATAAGCTAAGGGATCGA PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:1f211d87501f	40	11.90	0.57	strong_positive	0.33
GCTATGCTTACTATGGGATGGGCTATTTCTAATCTACTGC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:9239af3fb897	40	11.90	0.49	strong_positive	0.33
GGAGGCTAATGTGCGCTAATCGCAAACCGTGTTTCTACTC PANAPTA:Q96DH6:MSI2:PRJEB47428:R4:02a7aaa210e3	40	11.90	0.62	strong_positive	0.33

SELEX rounds

R1 R2 R3 R4 ·final

Structural & language-model features

JSON ↗

Pre-computed feature catalog (paths only — files served separately).

Residues

328

FASTA

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ESM-2 mean

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ESM-2 per-residue

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