These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAGCACCTGGGACCGCGTGGGGGCTCGTCAGGCAAGGGCT | 1 | 4.68367e-06 |
| AAGCACGAAGGGGGATCCACGCGTGGGTGCATGCGTGTCG | 1 | 4.68367e-06 |
| AAGCACGCAGAGATCACGTCGTGGGGGGTCCACCTAATTG | 1 | 4.68367e-06 |
| AAGCACGCATGCGGTATGGTTAGGCCGAGTGTCATGCACA | 2 | 9.36733e-06 |
| AAGCACGCCCCACCCACGTGCTGGTGATTTCGGTTGGTCG | 1 | 4.68367e-06 |
| AAGCACGCTCGTGGGGAGGAGATTATGTGGCTGTGAATAC | 1 | 4.68367e-06 |
| AAGCACGTGATGGCATGAGGGGCACGAGTGGGACTTGTAT | 1 | 4.68367e-06 |
| AAGCACGTGGACACTTTGGCGCGGGAGTGCTTCCGTGGGT | 2 | 9.36733e-06 |
| AAGCACTAGGCACCGTTACACTGGAGATGTCGTGGGCTGC | 1 | 4.68367e-06 |
| AAGCACTATTGGGCGGGCAGCCTCCGCTACTTATGCGGGC | 1 | 4.68367e-06 |
| AAGCACTGGGGCCCGTCCACGGGTGGGGGCTCAGTGAGAA | 1 | 4.68367e-06 |
| AAGCACTGGGTGGGTGTGGAATTCCGAACTGATCGTGGGC | 1 | 4.68367e-06 |
| AAGCACTTAAATCATTGCGTAGGTACGCACAACCATCCAT | 1 | 4.68367e-06 |
| AAGCAGAGGAGGGTTCCACGGCGATCTGCGTGGTGTGGGG | 1 | 4.68367e-06 |
| AAGCAGATTCGTAATTGTCACGCGGAGACTACGGTCCGTT | 1 | 4.68367e-06 |
| AAGCAGCCCCACTCGGGGCATTTGCTTGGTGCGTGGAGAA | 1 | 4.68367e-06 |
| AAGCAGCGAAGGCGTGGTAAACTGGTGATGTTACGACACA | 1 | 4.68367e-06 |
| AAGCAGCGGAGGCGTAGTCAAGCTTCAGTGGGACTGTCTT | 1 | 4.68367e-06 |
| AAGCAGCGGGGGTGGTTGATGGGGCGGTCTGTGAGGTGGT | 1 | 4.68367e-06 |
| AAGCAGCGTCCGTGGATAACGTAGCTTCGGGATACCACCG | 1 | 4.68367e-06 |
| AAGCAGCGTGGTTTAGTCGTTCGTGGGCGTATATGGAGTG | 1 | 4.68367e-06 |
| AAGCAGCTGCCGTGGAGCGGGAGGAAAGTGGGGATTGCCC | 1 | 4.68367e-06 |
| AAGCAGCTGTGGGGGCGGAGGGCGTGATGTAGGGCAAGAC | 1 | 4.68367e-06 |
| AAGCAGCTTGCGTGTTGCGTCGCATTGGGGTCGTGGCTGG | 1 | 4.68367e-06 |
| AAGCAGGCGAGTGGGCCAGTGCGTGGAGGGCCCGGCCGTC | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.