These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR8016773
BEND3-d4_CC40NCGTTTTYWCA2
- Reads
- 213,508
- Distinct strings in file
- 209,915
- File size
- 2.6 MiB
Source attribution · SHA-256
- Source project:
- PRJEB49150
- Archive record:
- ERR8016773
- Sample:
- SAMEA12312958
- SHA-256
- d48e27b6ccb7db66a8050708dfe647c7b8de952a94f56ff8928488486bbf67bc
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AATAAAGGTAGAGCGGCTCCTGCACGGCGAGGAGATGGCC | 1 | 4.68367e-06 |
| AATAAAGTCCACGGGGTCCGTAATTGTGGTCGTCCGCGCT | 1 | 4.68367e-06 |
| AATAAATATGTGAGTGAGTGTGCTATATTTCCTGTAGTAG | 1 | 4.68367e-06 |
| AATAAATGCGGTGTGGAAACGGTTGATTCCCTGCGTGGCA | 1 | 4.68367e-06 |
| AATAACAAGTGGGGTCGTACTCGTGGACGGTACGTACGAG | 1 | 4.68367e-06 |
| AATAACAATCGTCCACGCAGGCGTTAGCCGCTAGTGCACG | 1 | 4.68367e-06 |
| AATAACACGCGTGGTTACGCGCGGAACCGAATCTACTTTG | 1 | 4.68367e-06 |
| AATAACACGTGGATCGTCTACCGGGAGCGTTCGTGTTCCC | 1 | 4.68367e-06 |
| AATAACCACGCGAGACGGGTGAGTGTTGGACGCGTGGAGT | 1 | 4.68367e-06 |
| AATAACGCGCGGCGGACGGTTTAAACGCGGGGATTACTAC | 1 | 4.68367e-06 |
| AATAACGCGTCCCCTCGTGATACATTGTAGGTTCACGTGA | 1 | 4.68367e-06 |
| AATAACGTGCAGGCCGCGTGGAACTTAGTAGTGATTAGGT | 1 | 4.68367e-06 |
| AATAACGTTGGTAAGCGTGGGTAAGAGTTCCGATTCAGCA | 1 | 4.68367e-06 |
| AATAACTACCCTGTTCGCAGGTGAGGTGTCGTTGTGGACC | 1 | 4.68367e-06 |
| AATAACTCTATTGCCGGGTATTCGTGTGGGGTGCGTGGGG | 1 | 4.68367e-06 |
| AATAACTCTCTGCACTTGTGAGCTGCGTGATTGGGAGCGT | 1 | 4.68367e-06 |
| AATAAGAACCTGCGAGTGGCTACTCGGAGCCATTCGTGGA | 1 | 4.68367e-06 |
| AATAAGACGCGCGTGTTGGCGTCGGGGAAGGGCACATGCC | 1 | 4.68367e-06 |
| AATAAGATCTGCGAGCGGTCACGCGTGGCGGGGTGTGGTA | 1 | 4.68367e-06 |
| AATAAGCATAGGCACTAGGTTCTTGTGGGCAATAATACAC | 1 | 4.68367e-06 |
| AATAAGCGAATATGACCTTCTTGCGAACTGGCGGATGACA | 1 | 4.68367e-06 |
| AATAAGCGTCTATTAGTGTACGTAAATTTTTAGAGGGTCC | 1 | 4.68367e-06 |
| AATAAGCTCCCATGCGTGGGAAATGTCGTCCGCGTACAAA | 1 | 4.68367e-06 |
| AATAAGGAGAGAGGGGGAGCCGGACTGATGGGGATTCAAG | 1 | 4.68367e-06 |
| AATAAGGATGCAGGGCTTGCACTCACGTGCGTGGGCGCAG | 1 | 4.68367e-06 |
Read fractions use all reads in this source file as the denominator.